Snakemake

This is the development home of the workflow management system Snakemake. For general information, see

Execution Environment

  • Resource Managers

  • any DRM providing a script based submission interface (e.g. slurm, lsf, pbs, ...)
  • kubernetes
  • google life sciences API
  • tibanna
  • TES

Contributors

521   |   2158   |   1055   |   MIT

johanneskoestergithub-actions[bot]percyfaltomkinscstolpeorasmusagrentboothvsochHenningTimmchrisburrholtgrewedlaehnemannmarcelmdependabot[bot]bowDarwinAwardWinnermbhall88FelixMoelderfgvieiraepruessemelundboulundyesimonpvandykendalermdehollanderdcrootekemalerenjfearMaarten-vd-Sande