Snakemake

This is the development home of the workflow management system Snakemake. For general information, see

Execution Environment

  • Resource Managers

  • any DRM providing a script based submission interface (e.g. slurm, lsf, pbs, ...)
  • kubernetes
  • google life sciences API
  • tibanna
  • TES

Contributors

415   |   1636   |   772   |   MIT

johanneskoesterpercyfaltomkinscgithub-actions[bot]rasmusagrentboothvsochHenningTimmchrisburrholtgrewedlaehnemannmarcelmDarwinAwardWinnerbowepruessedependabot[bot]FelixMoelderboulundmbhall88yesimonmelundpvandykendalerdcrootejfearkemalerenmdehollanderchrarnoldjayhesselberthgoi42