Nextflow

Nextflow is an open-source workflow orchestrator that simplifies writing and deploying containerised data pipelines in a portable and scalable manner. It supports deploying workflows on a variety of execution platforms including local computers, HPC batch schedulers, Kubernetes and cloud platforms such as AWS, Azure and Google Cloud.

Execution Environment

  • User Interfaces

  • GitHub
  • GitLab
  • BitBucket
  • Resource Managers

  • Slurm
  • LSF
  • PBS/Torque
  • PBS Pro
  • SGE
  • Moab
  • HTCondor
  • Bridge
  • HyperQueue
  • GLS
  • NQSII
  • OAR
  • Local
  • AWS
  • GCP
  • Azure
  • Kubernetes
  • Transfer Protocols

  • HTTP
  • HTTPS
  • FTP
  • Amazon S3
  • Google Storage
  • Azure Storage
  • Git+HTTPS

Contributors

594   |   2564   |   381   |   Apache-2.0

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